Last updated: 2022-03-16
Checks: 1 1
Knit directory: codemapper/
This reproducible R Markdown analysis was created with workflowr (version 1.6.2). The Checks tab describes the reproducibility checks that were applied when the results were created. The Past versions tab lists the development history.
The R Markdown file has unstaged changes. To know which version of the R Markdown file created these results, you’ll want to first commit it to the Git repo. If you’re still working on the analysis, you can ignore this warning. When you’re finished, you can run wflow_publish to commit the R Markdown file and build the HTML.
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The results in this page were generated with repository version b425304. See the Past versions tab to see a history of the changes made to the R Markdown and HTML files.
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Ignored files:
Ignored: .Renviron
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Ignored: .Rproj.user/
Ignored: _targets/
Ignored: all_lkps_maps.db
Ignored: all_lkps_maps.db.gz
Ignored: analysis/figure/
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Ignored: renv/staging/
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Unstaged changes:
Modified: analysis/index.Rmd
Staged changes:
Modified: R/clinical_codes.R
Modified: R/lookups_and_mappings.R
Modified: R/utils.R
Modified: _targets.R
Modified: analysis/read2_icd10_mapping.Rmd
Modified: analysis/read3_icd10_mapping.Rmd
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These are the previous versions of the repository in which changes were made to the R Markdown (analysis/index.Rmd) and HTML (public/index.html) files. If you’ve configured a remote Git repository (see ?wflow_git_remote), click on the hyperlinks in the table below to view the files as they were in that past version.
| File | Version | Author | Date | Message |
|---|---|---|---|---|
| Rmd | e5c5381 | rmgpanw | 2022-03-10 | update mainly icd10-related codes. |
| Rmd | a64a35e | rmgpanw | 2022-03-10 | change arg quiet = TRUE to unrecognised_codes = “error”. Also updated tests (passing) |
| Rmd | dfbc621 | Chuin Ying Ung | 2022-02-22 | add mapping notes |
| html | dfbc621 | Chuin Ying Ung | 2022-02-22 | add mapping notes |
| html | d777258 | Chuin Ying Ung | 2022-02-22 | merge with dev_cy branch |
| Rmd | 5b80a79 | Chuin Ying Ung | 2022-02-22 | update notes |
| html | 5b80a79 | Chuin Ying Ung | 2022-02-22 | update notes |
| html | 81047b4 | rmgpanw | 2022-02-17 | setup for gitlab CI with pkgdown site and test coverage; start adding read3 to snomed mapping |
| html | 5c2a3e3 | Chuin Ying Ung | 2022-02-17 | update _targets.R (housekeeping) and phecode.Rmd |
| Rmd | 919be0d | rmgpanw | 2021-10-07 | renamed functions and made shiny app for selecting codes |
| html | 919be0d | rmgpanw | 2021-10-07 | renamed functions and made shiny app for selecting codes |
| Rmd | 3fe5ae7 | rmgpanw | 2021-09-23 | initial commit |
Notes on adapting raw lookup and mapping tables for codemapper (see also pkgdown site)